The objective of the group will be to investigate the formation, maintenance and consequences of extrachromosomal DNA (ecDNA) in cancer using cutting edge single-cell screening and spatial technologies. ecDNA leads to high amplification of oncogenes or genes involved in drug resistance under selective pressures and has a prominent role in cancer heterogeneity. The overarching goal will be to identify druggable targets that reduce ecDNA abundance in cancer – and hence ablating a potent tool of genetic heterogeneity and a powerhorse of drug resistance in cancer.
Mentors
Dr. Balca Mardin (Industry mentor)
Head of Laboratory, DNA Damage Response Research at Merck
Dr. Sebastian M. Waszak (Academic mentor)
Group Leader, Computational Oncology Group, Centre for Molecular Medicine Norway (NCMM), University of Oslo & Associate Professor, Neurology, University of California, San Francisco
2018 – 2022: Postdoc in investigating drug resistance and cancer heterogeneity in Small Cell Lung Cancer in the laboratory of Prof. Julien Sage; TRDRP fellow, Division of Pediatrics and Genetics, Stanford Medical University, Stanford, CA, USA
2017 – 2018: PhD Graduate in Dr. Jan Korbel’s laboratory, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany
2012 – 2016: PhD in Molecular Biology. Supervisor: Dr. Jan Korbel, EMBL, Heidelberg, Germany
2021 – 2023 Senior Scientist at GSK, Cellzome in Heidelberg, Germany
2018 – 2021 Master of Science in Molecular Biosciences with a major in Cancer Biology at Heidelberg University and German Cancer Research Center Heidelberg (DKFZ), Heidelberg, Germany
2015 – 2018 Bachelor of Science in Biosciences at Heidelberg University, Heidelberg, Germany
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Splicing of mRNA is a crucial process in eukaryotic gene expression regulation, and aberrant splicing plays a critical role in the pathogenesis of several molecular subtypes of cancer. Such splicing abnormalities can lead to constitutive activity of oncogenes, reduced expression of tumor suppressors, or drug resistance. Our team is seeking to identify key molecular mechanisms that generate mRNA sp…